Afra Zomorodian

afra at cs.stanford.edu
personal page

Research interests

Computational topology and geometry, computational structural biology, computer graphics, visualization, programming methodology

Recent publications

F. Cazals, J. Giesen, M. Pauly, and A. Zomorodian, The Conformal Alpha Shape Filtration, The Visual Computer, to appear.   
A. Zomorodian, L. J. Guibas, and P. Koehl, Geometric Filtering of Pairwise Atomic Interactions Applied to the Design of Efficient Statistical Potentials, Computer Aided Geometric Design, to appear.   
G. Carlsson, A. Zomorodian, A. Collins, and L. Guibas. Persistence Barcodes for Shapes. International Journal of Shape Modeling, 11 (2005), 149-187.   
F. Cazals, J. Giesen, M. Pauly, A. Zomorodian, Conformal Alpha Shapes, Symposium on Point-Based Graphics (2005), pp. 55-61.   
A. Zomorodian, G. Carlsson, Computing Persistent Homology, Discrete and Computational Geometry 33 (2005), 249-274.   
A. Collins, A. Zomorodian, G. Carlsson, and L. Guibas. A Barcode Shape Descriptor for Curve Point Cloud Data. Computers & Graphics 28 (2004), pp. 881-894.   
A. Zomorodian, G. Carlsson, Computing Persistent Homology, Proc. Symp. Comput. Geom. (2004), pp. 347-356.   
A. Collins, A. Zomorodian, G. Carlsson, and L. Guibas. A Barcode Shape Descriptor for Curve Point Cloud Data. Proc. Symp. Point-Based Graphics (2004), pp. 181-191.   
G. Carlsson, A. Zomorodian, A. Collins, and L. Guibas. Persistence Barcodes for Shapes. Proc. Symp. Geometry Processing (2004), pp. 127-138.   
H. Edelsbrunner, J. Harer, A. Zomorodian, Hierarchical Morse-Smale Complexes for Piecewise Linear 2-Manifolds, Discrete Comp. Geom., 30 (2003), 87-107.   
H. Edelsbrunner and A. Zomorodian, Computing Linking Numbers of a Filtration, Homology, Homotopy and Applications, 5:2 (2003), 19-37.   
H. Edelsbrunner, D. Letscher, and A. Zomorodian, Topological Persistence and Simplification, Discrete Comput. Geom., 28 (2002), 511--533.   
A. Zomorodian and H. Edelsbrunner, Fast Software for Box Intersection, Int. J. Comput. Geom. Appl., 12 (2002), 143-172.   
H. Edelsbrunner, J. Harer, and A. Zomorodian, Hierarchical Morse Complexes for Piecewise Linear 2-Manifolds, In Proc. 17th. Ann. ACM Sympos. Comput. Geom. (2001), pp. 70-79.   
H. Edelsbrunner and A. Zomorodian, Computing Linking Numbers in a Filtration, Algorithms in Bioinformatics (LNCS 2149) (2001), pp. 112-127.   
H. Edelsbrunner, D. Letscher, A. Zomorodian, Topological Persistence and Simplification, In Proc. 41st Ann. IEEE Sympos. Found Comput. Sci (2000), pp. 454-463.   
A. Zomorodian and H. Edelsbrunner, Fast Software for Box Intersection, In Proc. 16th Ann. ACM Sympos. Comput. Geom. (2000), pp. 129-138.